STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYG_00752parB-like partition protein; COG1475 Predicted transcriptional regulators. (285 aa)    
Predicted Functional Partners:
KYG_00757
Partitioning protein; COG1192 ATPases involved in chromosome partitioning.
 
 
 0.851
KYG_03361
Cobyrinic acid ac-diamide synthase; COG1192 ATPases involved in chromosome partitioning.
 
 
 0.696
KYG_15205
Cobyrinic acid ac-diamide synthase; COG1192 ATPases involved in chromosome partitioning.
  
 
 0.654
KYG_06976
Cobyrinic acid ac-diamide synthase; COG1192 ATPases involved in chromosome partitioning.
  
 
 0.644
KYG_07106
Hypothetical protein.
  
 
 0.644
KYG_09770
Cobyrinic acid ac-diamide synthase; COG1192 ATPases involved in chromosome partitioning.
  
 
 0.644
gidB
16S rRNA methyltransferase GidB; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA.
  
  
 0.616
KYG_08025
Hypothetical protein.
  
     0.612
KYG_21484
LuxR family transcriptional regulator; COG2771 DNA-binding HTH domain-containing proteins.
  
     0.570
KYG_00632
COG0582 Integrase; Belongs to the 'phage' integrase family.
  
  
 0.548
Your Current Organism:
Nocardioides sp. SLBN35
NCBI taxonomy Id: 512030
Other names: Acidovorax sp. NO1, N. sp. SLBN-35, Nocardioides sp. SLBN-35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.