STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYG_01492COG3019 Predicted metal-binding protein. (153 aa)    
Predicted Functional Partners:
KYG_01487
Hypothetical protein.
 
     0.818
KYG_01497
Blue (type1) copper domain-containing protein; COG4454 Uncharacterized copper-binding protein.
 
    0.683
KYG_01477
Hypothetical protein.
 
     0.678
KYG_01472
COG2020 Putative protein-S-isoprenylcysteine methyltransferase.
 
     0.622
KYG_01502
Multicopper oxidase type 3.
       0.573
KYG_01462
COG2010 Cytochrome c, mono- and diheme variants.
 
     0.560
KYG_01482
Hypothetical protein.
       0.553
KYG_01467
Putative cation-transporting ATPase transmembrane protein; COG2217 Cation transport ATPase.
     
 0.482
Your Current Organism:
Nocardioides sp. SLBN35
NCBI taxonomy Id: 512030
Other names: Acidovorax sp. NO1, N. sp. SLBN-35, Nocardioides sp. SLBN-35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.