STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYG_01507COG2217 Cation transport ATPase. (688 aa)    
Predicted Functional Partners:
KYG_00025
COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases.
  
 
 0.813
KYG_06304
Putative ring-hydroxylation complex protein 4; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
    
 0.808
KYG_01452
Heavy metal translocating P-type ATPase.
   
 0.789
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
  0.776
KYG_13266
Heavy metal transport/detoxification protein; COG2608 Copper chaperone.
 
 
 0.736
KYG_06836
Rieske (2Fe-2S) domain-containing protein; COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases.
   
  0.714
KYG_14223
COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases.
   
  0.714
KYG_22026
COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases.
   
  0.714
merP
MerP; Involved in mercury resistance. Acts as a mercury scavenger that specifically binds to a mercuric ion in the periplasm and probably passes it to the cytoplasmic mercuric reductase MerA via the mercuric transport protein MerT.
  
 
 0.691
KYG_04160
Putative cation-transporting ATPase transmembrane protein; COG2217 Cation transport ATPase.
  
 
 0.691
Your Current Organism:
Nocardioides sp. SLBN35
NCBI taxonomy Id: 512030
Other names: Acidovorax sp. NO1, N. sp. SLBN-35, Nocardioides sp. SLBN-35
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