STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYG_01822Gcn5-like n-acetyltransferase; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases. (153 aa)    
Predicted Functional Partners:
KYG_01807
COG3454 Metal-dependent hydrolase involved in phosphonate metabolism.
 
    0.849
KYG_01827
Phosphonate metabolism PhnJ; Catalyzes the breakage of the C-P bond in alpha-D-ribose 1- methylphosphonate 5-phosphate (PRPn) forming alpha-D-ribose. Belongs to the PhnJ family.
 
    0.849
KYG_01832
Phosphonate metabolism; COG3626 Uncharacterized enzyme of phosphonate metabolism.
 
    0.844
KYG_01812
Phosphonate C-P lyase system protein PhnL; COG4778 ABC-type phosphonate transport system, ATPase component.
 
     0.842
KYG_01837
Phosphonate C-P lyase system protein PhnH; COG3625 Uncharacterized enzyme of phosphonate metabolism.
 
    0.838
phnK
Phosphonate C-P lyase system protein PhnK; COG4107 ABC-type phosphonate transport system, ATPase component.
 
    0.834
KYG_01842
Phosphonate C-P lyase system protein PhnG; COG3624 Uncharacterized enzyme of phosphonate metabolism.
 
    0.833
KYG_01847
COG2188 Transcriptional regulators.
 
  
 0.764
argA
N-acetylglutamate synthase; COG0548 Acetylglutamate kinase; Belongs to the acetyltransferase family. ArgA subfamily.
    
 0.684
KYG_01852
Hypothetical protein.
 
     0.671
Your Current Organism:
Nocardioides sp. SLBN35
NCBI taxonomy Id: 512030
Other names: Acidovorax sp. NO1, N. sp. SLBN-35, Nocardioides sp. SLBN-35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.