Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KYG_02027COG2181 Nitrate reductase gamma subunit. (243 aa)    
Predicted Functional Partners:
KYG_02037
COG1140 Nitrate reductase beta subunit.
 
 0.999
KYG_02042
COG5013 Nitrate reductase alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.999
KYG_02032
Nitrate reductase molybdenum cofactor assembly chaperone; COG2180 Nitrate reductase delta subunit.
 
  
 0.997
KYG_02047
COG2223 Nitrate/nitrite transporter.
 
 
 0.994
KYG_02052
Major facilitator superfamily protein; COG2223 Nitrate/nitrite transporter.
 
 
 0.993
KYG_22011
Major facilitator transporter; COG2223 Nitrate/nitrite transporter.
 
 
 0.940
KYG_22021
Nitrite reductase (NAD(P)H) large subunit; COG1251 NAD(P)H-nitrite reductase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
 
 0.939
KYG_22026
COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases.
  
 
 0.937
KYG_03726
Hypothetical protein; COG1145 Ferredoxin.
  
 
 0.903
KYG_22031
Molybdopterin oxidoreductase; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
     
 0.885
Your Current Organism:
Nocardioides sp. SLBN35
NCBI taxonomy Id: 512030
Other names: Acidovorax sp. NO1, N. sp. SLBN-35, Nocardioides sp. SLBN-35
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.