Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
KYG_02027 | KYG_02032 | COG2181 Nitrate reductase gamma subunit. | Nitrate reductase molybdenum cofactor assembly chaperone; COG2180 Nitrate reductase delta subunit. | 0.998 |
KYG_02027 | KYG_02037 | COG2181 Nitrate reductase gamma subunit. | COG1140 Nitrate reductase beta subunit. | 0.999 |
KYG_02027 | KYG_02042 | COG2181 Nitrate reductase gamma subunit. | COG5013 Nitrate reductase alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.999 |
KYG_02027 | KYG_02047 | COG2181 Nitrate reductase gamma subunit. | COG2223 Nitrate/nitrite transporter. | 0.995 |
KYG_02027 | KYG_02052 | COG2181 Nitrate reductase gamma subunit. | Major facilitator superfamily protein; COG2223 Nitrate/nitrite transporter. | 0.994 |
KYG_02027 | KYG_17202 | COG2181 Nitrate reductase gamma subunit. | COG2070 Dioxygenases related to 2-nitropropane dioxygenase. | 0.905 |
KYG_02027 | KYG_22011 | COG2181 Nitrate reductase gamma subunit. | Major facilitator transporter; COG2223 Nitrate/nitrite transporter. | 0.943 |
KYG_02027 | KYG_22021 | COG2181 Nitrate reductase gamma subunit. | Nitrite reductase (NAD(P)H) large subunit; COG1251 NAD(P)H-nitrite reductase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.937 |
KYG_02027 | KYG_22026 | COG2181 Nitrate reductase gamma subunit. | COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases. | 0.948 |
KYG_02027 | KYG_22031 | COG2181 Nitrate reductase gamma subunit. | Molybdopterin oxidoreductase; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | 0.909 |
KYG_02032 | KYG_02027 | Nitrate reductase molybdenum cofactor assembly chaperone; COG2180 Nitrate reductase delta subunit. | COG2181 Nitrate reductase gamma subunit. | 0.998 |
KYG_02032 | KYG_02037 | Nitrate reductase molybdenum cofactor assembly chaperone; COG2180 Nitrate reductase delta subunit. | COG1140 Nitrate reductase beta subunit. | 0.999 |
KYG_02032 | KYG_02042 | Nitrate reductase molybdenum cofactor assembly chaperone; COG2180 Nitrate reductase delta subunit. | COG5013 Nitrate reductase alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.999 |
KYG_02032 | KYG_02047 | Nitrate reductase molybdenum cofactor assembly chaperone; COG2180 Nitrate reductase delta subunit. | COG2223 Nitrate/nitrite transporter. | 0.952 |
KYG_02032 | KYG_02052 | Nitrate reductase molybdenum cofactor assembly chaperone; COG2180 Nitrate reductase delta subunit. | Major facilitator superfamily protein; COG2223 Nitrate/nitrite transporter. | 0.946 |
KYG_02032 | KYG_22011 | Nitrate reductase molybdenum cofactor assembly chaperone; COG2180 Nitrate reductase delta subunit. | Major facilitator transporter; COG2223 Nitrate/nitrite transporter. | 0.813 |
KYG_02032 | KYG_22026 | Nitrate reductase molybdenum cofactor assembly chaperone; COG2180 Nitrate reductase delta subunit. | COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases. | 0.569 |
KYG_02037 | KYG_02027 | COG1140 Nitrate reductase beta subunit. | COG2181 Nitrate reductase gamma subunit. | 0.999 |
KYG_02037 | KYG_02032 | COG1140 Nitrate reductase beta subunit. | Nitrate reductase molybdenum cofactor assembly chaperone; COG2180 Nitrate reductase delta subunit. | 0.999 |
KYG_02037 | KYG_02042 | COG1140 Nitrate reductase beta subunit. | COG5013 Nitrate reductase alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.999 |
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