STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYG_02487Family 2 glycosyl transferase; COG0500 SAM-dependent methyltransferases. (1245 aa)    
Predicted Functional Partners:
KYG_02372
WxcM domain-containing protein; COG0110 Acetyltransferase (isoleucine patch superfamily).
  
 
 0.955
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.947
KYG_02462
ABC-2 type transporter; COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component.
 
 
 0.937
KYG_08630
COG4786 Flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family.
  
 
 0.937
KYG_12889
COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
 
 0.934
KYG_06109
Polysaccharide biosynthesis protein CapD; COG1086 Predicted nucleoside-diphosphate sugar epimerases.
  
 
 0.932
KYG_11619
Type 12 methyltransferase; COG0457 FOG: TPR repeat.
  
 0.929
KYG_06144
COG2148 Sugar transferases involved in lipopolysaccharide synthesis.
  
 
 0.928
KYG_11999
Hypothetical protein; COG0457 FOG: TPR repeat.
  
 
 0.928
KYG_17527
COG4913 Uncharacterized protein conserved in bacteria.
  
   0.918
Your Current Organism:
Nocardioides sp. SLBN35
NCBI taxonomy Id: 512030
Other names: Acidovorax sp. NO1, N. sp. SLBN-35, Nocardioides sp. SLBN-35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.