Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
KYG_02537 | KYG_02542 | COG4731 Uncharacterized protein conserved in bacteria. | COG1250 3-hydroxyacyl-CoA dehydrogenase. | 0.753 |
KYG_02537 | KYG_02547 | COG4731 Uncharacterized protein conserved in bacteria. | Hypothetical protein. | 0.509 |
KYG_02537 | KYG_02552 | COG4731 Uncharacterized protein conserved in bacteria. | COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.704 |
KYG_02537 | KYG_02557 | COG4731 Uncharacterized protein conserved in bacteria. | Putative hydrolase; COG4757 Predicted alpha/beta hydrolase. | 0.468 |
KYG_02537 | KYG_02562 | COG4731 Uncharacterized protein conserved in bacteria. | Hypothetical protein. | 0.556 |
KYG_02542 | KYG_02537 | COG1250 3-hydroxyacyl-CoA dehydrogenase. | COG4731 Uncharacterized protein conserved in bacteria. | 0.753 |
KYG_02542 | KYG_02547 | COG1250 3-hydroxyacyl-CoA dehydrogenase. | Hypothetical protein. | 0.804 |
KYG_02542 | KYG_02552 | COG1250 3-hydroxyacyl-CoA dehydrogenase. | COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.999 |
KYG_02542 | KYG_02557 | COG1250 3-hydroxyacyl-CoA dehydrogenase. | Putative hydrolase; COG4757 Predicted alpha/beta hydrolase. | 0.521 |
KYG_02542 | KYG_02562 | COG1250 3-hydroxyacyl-CoA dehydrogenase. | Hypothetical protein. | 0.586 |
KYG_02542 | KYG_02567 | COG1250 3-hydroxyacyl-CoA dehydrogenase. | COG1024 Enoyl-CoA hydratase/carnithine racemase. | 0.514 |
KYG_02547 | KYG_02537 | Hypothetical protein. | COG4731 Uncharacterized protein conserved in bacteria. | 0.509 |
KYG_02547 | KYG_02542 | Hypothetical protein. | COG1250 3-hydroxyacyl-CoA dehydrogenase. | 0.804 |
KYG_02547 | KYG_02552 | Hypothetical protein. | COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.759 |
KYG_02547 | KYG_02557 | Hypothetical protein. | Putative hydrolase; COG4757 Predicted alpha/beta hydrolase. | 0.510 |
KYG_02552 | KYG_02537 | COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | COG4731 Uncharacterized protein conserved in bacteria. | 0.704 |
KYG_02552 | KYG_02542 | COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | COG1250 3-hydroxyacyl-CoA dehydrogenase. | 0.999 |
KYG_02552 | KYG_02547 | COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Hypothetical protein. | 0.759 |
KYG_02552 | KYG_02557 | COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Putative hydrolase; COG4757 Predicted alpha/beta hydrolase. | 0.484 |
KYG_02552 | KYG_02562 | COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Hypothetical protein. | 0.467 |
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