STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYG_02562Hypothetical protein. (244 aa)    
Predicted Functional Partners:
KYG_02567
COG1024 Enoyl-CoA hydratase/carnithine racemase.
  
  
 0.691
KYG_00395
Hypothetical protein.
  
     0.676
KYG_02557
Putative hydrolase; COG4757 Predicted alpha/beta hydrolase.
 
     0.616
KYG_02542
COG1250 3-hydroxyacyl-CoA dehydrogenase.
  
  
 0.586
KYG_19113
Hypothetical protein; COG1073 Hydrolases of the alpha/beta superfamily.
     
 0.572
KYG_02537
COG4731 Uncharacterized protein conserved in bacteria.
 
     0.556
KYG_06209
Protease Do; COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; Belongs to the peptidase S1C family.
   
 
 0.539
KYG_12439
Peptidase S1 and S6, chymotrypsin/Hap; COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain.
   
 
 0.539
KYG_18024
COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain.
   
 
 0.539
KYG_18836
COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain.
   
 
 0.539
Your Current Organism:
Nocardioides sp. SLBN35
NCBI taxonomy Id: 512030
Other names: Acidovorax sp. NO1, N. sp. SLBN-35, Nocardioides sp. SLBN-35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.