Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
KYG_02782 | KYG_02787 | Extradiol ring-cleavage dioxygenase III subunit B. | Phospholipase/carboxylesterase; COG0400 Predicted esterase. | 0.662 |
KYG_02782 | KYG_02792 | Extradiol ring-cleavage dioxygenase III subunit B. | Hypothetical protein. | 0.409 |
KYG_02787 | KYG_02782 | Phospholipase/carboxylesterase; COG0400 Predicted esterase. | Extradiol ring-cleavage dioxygenase III subunit B. | 0.662 |
KYG_02787 | KYG_02792 | Phospholipase/carboxylesterase; COG0400 Predicted esterase. | Hypothetical protein. | 0.517 |
KYG_02792 | KYG_02782 | Hypothetical protein. | Extradiol ring-cleavage dioxygenase III subunit B. | 0.409 |
KYG_02792 | KYG_02787 | Hypothetical protein. | Phospholipase/carboxylesterase; COG0400 Predicted esterase. | 0.517 |
KYG_02792 | KYG_06931 | Hypothetical protein. | COG4645 Uncharacterized protein conserved in bacteria. | 0.488 |
KYG_02792 | KYG_11584 | Hypothetical protein. | Peptidase M48, Ste24p; COG0501 Zn-dependent protease with chaperone function. | 0.458 |
KYG_02792 | KYG_18841 | Hypothetical protein. | Hypothetical protein; COG0665 Glycine/D-amino acid oxidases (deaminating). | 0.436 |
KYG_02792 | KYG_21926 | Hypothetical protein. | RNA polymerase sigma-70 family protein; COG5343 Uncharacterized protein conserved in bacteria. | 0.420 |
KYG_02792 | KYG_22660 | Hypothetical protein. | Peptidoglycan-binding domain 1 protein; COG3267 Type II secretory pathway, component ExeA (predicted ATPase). | 0.402 |
KYG_02792 | KYG_23275 | Hypothetical protein. | single-stranded-DNA-specific exonuclease RecJ; COG0608 Single-stranded DNA-specific exonuclease. | 0.945 |
KYG_06931 | KYG_02792 | COG4645 Uncharacterized protein conserved in bacteria. | Hypothetical protein. | 0.488 |
KYG_06931 | KYG_11584 | COG4645 Uncharacterized protein conserved in bacteria. | Peptidase M48, Ste24p; COG0501 Zn-dependent protease with chaperone function. | 0.600 |
KYG_11584 | KYG_02792 | Peptidase M48, Ste24p; COG0501 Zn-dependent protease with chaperone function. | Hypothetical protein. | 0.458 |
KYG_11584 | KYG_06931 | Peptidase M48, Ste24p; COG0501 Zn-dependent protease with chaperone function. | COG4645 Uncharacterized protein conserved in bacteria. | 0.600 |
KYG_18841 | KYG_02792 | Hypothetical protein; COG0665 Glycine/D-amino acid oxidases (deaminating). | Hypothetical protein. | 0.436 |
KYG_21926 | KYG_02792 | RNA polymerase sigma-70 family protein; COG5343 Uncharacterized protein conserved in bacteria. | Hypothetical protein. | 0.420 |
KYG_22660 | KYG_02792 | Peptidoglycan-binding domain 1 protein; COG3267 Type II secretory pathway, component ExeA (predicted ATPase). | Hypothetical protein. | 0.402 |
KYG_23275 | KYG_02792 | single-stranded-DNA-specific exonuclease RecJ; COG0608 Single-stranded DNA-specific exonuclease. | Hypothetical protein. | 0.945 |