STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYG_03566Hypothetical protein. (130 aa)    
Predicted Functional Partners:
KYG_03561
Hypothetical protein.
  
    0.930
KYG_03571
COG2823 Predicted periplasmic or secreted lipoprotein.
  
    0.775
KYG_09985
Pyridoxamine 5'-phosphate oxidase-like FMN-binding protein; COG3871 Uncharacterized stress protein (general stress protein 26).
  
    0.760
KYG_12749
Hypothetical protein.
  
    0.753
KYG_16992
Hypothetical protein; COG2388 Predicted acetyltransferase.
  
    0.603
KYG_18254
COG2823 Predicted periplasmic or secreted lipoprotein.
  
    0.496
KYG_08285
COG2823 Predicted periplasmic or secreted lipoprotein.
  
    0.474
KYG_09670
COG0098 Ribosomal protein S5.
  
    0.474
KYG_15780
Hypothetical protein.
  
    0.474
KYG_22446
Transport protein; COG2823 Predicted periplasmic or secreted lipoprotein.
  
    0.474
Your Current Organism:
Nocardioides sp. SLBN35
NCBI taxonomy Id: 512030
Other names: Acidovorax sp. NO1, N. sp. SLBN-35, Nocardioides sp. SLBN-35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.