STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYG_04909COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1. (258 aa)    
Predicted Functional Partners:
KYG_00025
COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases.
    
 0.819
KYG_14298
Oxidoreductase FAD/NAD(P)-binding domain-containing protein; COG0369 Sulfite reductase, alpha subunit (flavoprotein).
     
 0.719
KYG_06314
phenylacetate-CoA oxygenase subunit PaaI.
  
 0.627
paaB
phenylacetate-CoA oxygenase subunit PaaB; COG3460 Uncharacterized enzyme of phenylacetate metabolism.
  
 
 0.613
KYG_20900
NAD(FAD)-dependent dehydrogenase; COG1773 Rubredoxin.
  
 
 0.606
paaA
phenylacetate-CoA oxygenase subunit PaaA.
  
 0.605
KYG_06309
phenylacetate-CoA oxygenase subunit PaaJ; COG2151 Predicted metal-sulfur cluster biosynthetic enzyme.
  
 
 0.586
KYG_07161
COG3239 Fatty acid desaturase.
  
 
 0.559
KYG_07421
COG0155 Sulfite reductase, beta subunit (hemoprotein).
 
  
 0.550
KYG_14223
COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases.
   
 
 0.513
Your Current Organism:
Nocardioides sp. SLBN35
NCBI taxonomy Id: 512030
Other names: Acidovorax sp. NO1, N. sp. SLBN-35, Nocardioides sp. SLBN-35
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