STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYG_05139Beta-lactamase domain-containing protein; COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes. (561 aa)    
Predicted Functional Partners:
KYG_20420
Hypothetical protein.
 
     0.741
KYG_05474
COG1846 Transcriptional regulators.
  
     0.716
KYG_07840
ZipA protein.
  
     0.659
KYG_09925
Hypothetical protein.
  
     0.647
KYG_05144
RNA-binding S4 domain-containing protein; COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases.
       0.641
KYG_12099
Hypothetical protein.
  
     0.635
KYG_14298
Oxidoreductase FAD/NAD(P)-binding domain-containing protein; COG0369 Sulfite reductase, alpha subunit (flavoprotein).
  
  
  0.635
KYG_15635
Hypothetical protein.
  
     0.620
KYG_01697
COG3453 Uncharacterized protein conserved in bacteria.
    
 0.610
KYG_01977
Hypothetical protein.
  
     0.608
Your Current Organism:
Nocardioides sp. SLBN35
NCBI taxonomy Id: 512030
Other names: Acidovorax sp. NO1, N. sp. SLBN-35, Nocardioides sp. SLBN-35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.