Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
KYG_00440 | KYG_05189 | NodT family RND efflux system outer membrane lipoprotein; COG1538 Outer membrane protein. | COG1566 Multidrug resistance efflux pump. | 0.843 |
KYG_00597 | KYG_05189 | emrB/QacA subfamily drug resistance transporter; COG0477 Permeases of the major facilitator superfamily. | COG1566 Multidrug resistance efflux pump. | 0.771 |
KYG_01517 | KYG_05189 | COG1538 Outer membrane protein. | COG1566 Multidrug resistance efflux pump. | 0.710 |
KYG_05184 | KYG_05189 | Outer membrane multidrug resistance lipoprotein; COG1538 Outer membrane protein. | COG1566 Multidrug resistance efflux pump. | 0.977 |
KYG_05184 | KYG_05194 | Outer membrane multidrug resistance lipoprotein; COG1538 Outer membrane protein. | Multidrug resistance transmembrane protein; COG0477 Permeases of the major facilitator superfamily. | 0.831 |
KYG_05189 | KYG_00440 | COG1566 Multidrug resistance efflux pump. | NodT family RND efflux system outer membrane lipoprotein; COG1538 Outer membrane protein. | 0.843 |
KYG_05189 | KYG_00597 | COG1566 Multidrug resistance efflux pump. | emrB/QacA subfamily drug resistance transporter; COG0477 Permeases of the major facilitator superfamily. | 0.771 |
KYG_05189 | KYG_01517 | COG1566 Multidrug resistance efflux pump. | COG1538 Outer membrane protein. | 0.710 |
KYG_05189 | KYG_05184 | COG1566 Multidrug resistance efflux pump. | Outer membrane multidrug resistance lipoprotein; COG1538 Outer membrane protein. | 0.977 |
KYG_05189 | KYG_05194 | COG1566 Multidrug resistance efflux pump. | Multidrug resistance transmembrane protein; COG0477 Permeases of the major facilitator superfamily. | 0.970 |
KYG_05189 | KYG_05654 | COG1566 Multidrug resistance efflux pump. | NodT family RND efflux system, outer membrane lipoprotein; COG1538 Outer membrane protein. | 0.813 |
KYG_05189 | KYG_09080 | COG1566 Multidrug resistance efflux pump. | Outer membrane efflux protein. | 0.710 |
KYG_05189 | KYG_11344 | COG1566 Multidrug resistance efflux pump. | Hypothetical protein. | 0.710 |
KYG_05189 | KYG_19263 | COG1566 Multidrug resistance efflux pump. | Fis family transcriptional regulator; COG1538 Outer membrane protein. | 0.823 |
KYG_05189 | KYG_21911 | COG1566 Multidrug resistance efflux pump. | RND efflux system outer membrane lipoprotein; COG1538 Outer membrane protein. | 0.803 |
KYG_05194 | KYG_05184 | Multidrug resistance transmembrane protein; COG0477 Permeases of the major facilitator superfamily. | Outer membrane multidrug resistance lipoprotein; COG1538 Outer membrane protein. | 0.831 |
KYG_05194 | KYG_05189 | Multidrug resistance transmembrane protein; COG0477 Permeases of the major facilitator superfamily. | COG1566 Multidrug resistance efflux pump. | 0.970 |
KYG_05654 | KYG_05189 | NodT family RND efflux system, outer membrane lipoprotein; COG1538 Outer membrane protein. | COG1566 Multidrug resistance efflux pump. | 0.813 |
KYG_09080 | KYG_05189 | Outer membrane efflux protein. | COG1566 Multidrug resistance efflux pump. | 0.710 |
KYG_11344 | KYG_05189 | Hypothetical protein. | COG1566 Multidrug resistance efflux pump. | 0.710 |
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