STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYG_05514FHA domain-containing protein; COG1716 FOG: FHA domain. (215 aa)    
Predicted Functional Partners:
KYG_05504
Serine/threonine protein kinase, bacterial; COG4252 Predicted transmembrane sensor domain.
 
 
 0.966
KYG_05509
COG0631 Serine/threonine protein phosphatase.
 
   
 0.904
KYG_05519
Adenylate/guanylate cyclase with chase sensor; COG4252 Predicted transmembrane sensor domain.
 
  
 0.878
sucA
COG0567 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes.
    
 
 0.878
KYG_10265
COG0515 Serine/threonine protein kinase.
 
 0.870
KYG_10605
Cyclic nucleotide-binding protein; COG0515 Serine/threonine protein kinase.
 
 
 
 0.862
KYG_04325
Protein kinase; COG0515 Serine/threonine protein kinase.
 
 
 0.834
KYG_11934
COG0515 Serine/threonine protein kinase.
 
 
 
 0.832
KYG_12624
COG0067 Glutamate synthase domain 1.
    
   0.818
KYG_22016
COG0631 Serine/threonine protein phosphatase.
 
 
 
 0.805
Your Current Organism:
Nocardioides sp. SLBN35
NCBI taxonomy Id: 512030
Other names: Acidovorax sp. NO1, N. sp. SLBN-35, Nocardioides sp. SLBN-35
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