Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
KYG_02934 | KYG_05759 | NAD(P)H dehydrogenase (quinone); COG0655 Multimeric flavodoxin WrbA. | Peptidoglycan-binding lysin domain-containing protein; COG1652 Uncharacterized protein containing LysM domain. | 0.430 |
KYG_02934 | KYG_05874 | NAD(P)H dehydrogenase (quinone); COG0655 Multimeric flavodoxin WrbA. | COG3126 Uncharacterized protein conserved in bacteria. | 0.719 |
KYG_02934 | KYG_23015 | NAD(P)H dehydrogenase (quinone); COG0655 Multimeric flavodoxin WrbA. | COG1652 Uncharacterized protein containing LysM domain. | 0.430 |
KYG_04010 | KYG_05874 | Hypothetical protein. | COG3126 Uncharacterized protein conserved in bacteria. | 0.610 |
KYG_05759 | KYG_02934 | Peptidoglycan-binding lysin domain-containing protein; COG1652 Uncharacterized protein containing LysM domain. | NAD(P)H dehydrogenase (quinone); COG0655 Multimeric flavodoxin WrbA. | 0.430 |
KYG_05759 | KYG_05874 | Peptidoglycan-binding lysin domain-containing protein; COG1652 Uncharacterized protein containing LysM domain. | COG3126 Uncharacterized protein conserved in bacteria. | 0.741 |
KYG_05759 | KYG_09375 | Peptidoglycan-binding lysin domain-containing protein; COG1652 Uncharacterized protein containing LysM domain. | NADPH-dependent FMN reductase; COG0655 Multimeric flavodoxin WrbA. | 0.430 |
KYG_05759 | KYG_18224 | Peptidoglycan-binding lysin domain-containing protein; COG1652 Uncharacterized protein containing LysM domain. | Flavodoxin/nitric oxide synthase; COG0655 Multimeric flavodoxin WrbA. | 0.430 |
KYG_05759 | KYG_22101 | Peptidoglycan-binding lysin domain-containing protein; COG1652 Uncharacterized protein containing LysM domain. | COG0655 Multimeric flavodoxin WrbA. | 0.430 |
KYG_05869 | KYG_05874 | COG3118 Thioredoxin domain-containing protein. | COG3126 Uncharacterized protein conserved in bacteria. | 0.785 |
KYG_05874 | KYG_02934 | COG3126 Uncharacterized protein conserved in bacteria. | NAD(P)H dehydrogenase (quinone); COG0655 Multimeric flavodoxin WrbA. | 0.719 |
KYG_05874 | KYG_04010 | COG3126 Uncharacterized protein conserved in bacteria. | Hypothetical protein. | 0.610 |
KYG_05874 | KYG_05759 | COG3126 Uncharacterized protein conserved in bacteria. | Peptidoglycan-binding lysin domain-containing protein; COG1652 Uncharacterized protein containing LysM domain. | 0.741 |
KYG_05874 | KYG_05869 | COG3126 Uncharacterized protein conserved in bacteria. | COG3118 Thioredoxin domain-containing protein. | 0.785 |
KYG_05874 | KYG_08430 | COG3126 Uncharacterized protein conserved in bacteria. | Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | 0.745 |
KYG_05874 | KYG_09375 | COG3126 Uncharacterized protein conserved in bacteria. | NADPH-dependent FMN reductase; COG0655 Multimeric flavodoxin WrbA. | 0.719 |
KYG_05874 | KYG_18224 | COG3126 Uncharacterized protein conserved in bacteria. | Flavodoxin/nitric oxide synthase; COG0655 Multimeric flavodoxin WrbA. | 0.719 |
KYG_05874 | KYG_22101 | COG3126 Uncharacterized protein conserved in bacteria. | COG0655 Multimeric flavodoxin WrbA. | 0.719 |
KYG_05874 | KYG_23015 | COG3126 Uncharacterized protein conserved in bacteria. | COG1652 Uncharacterized protein containing LysM domain. | 0.785 |
KYG_05874 | KYG_23710 | COG3126 Uncharacterized protein conserved in bacteria. | DNA polymerase III subunit epsilon; COG5002 Signal transduction histidine kinase. | 0.594 |
page 1 of 2