STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYG_06726Blue (type1) copper domain-containing protein; COG4454 Uncharacterized copper-binding protein. (88 aa)    
Predicted Functional Partners:
KYG_06731
Hypothetical protein.
 
     0.908
KYG_17302
Multicopper oxidase type 3.
 
 
 0.883
KYG_01502
Multicopper oxidase type 3.
 
 
 0.879
KYG_06741
COG2132 Putative multicopper oxidases.
 
 
 0.879
KYG_06736
Putative copper resistance-like lipoprotein.
 
     0.770
KYG_01487
Hypothetical protein.
 
     0.767
KYG_13156
Hypothetical protein.
 
     0.761
KYG_06746
Blue (type 1) copper domain protein.
  
     0.754
KYG_17317
Hypothetical protein.
 
     0.748
KYG_06776
Copper resistance-like lipoprotein.
 
     0.742
Your Current Organism:
Nocardioides sp. SLBN35
NCBI taxonomy Id: 512030
Other names: Acidovorax sp. NO1, N. sp. SLBN-35, Nocardioides sp. SLBN-35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.