STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYG_07141LuxR family transcriptional regulator; COG2771 DNA-binding HTH domain-containing proteins. (219 aa)    
Predicted Functional Partners:
KYG_10885
PAS/PAC sensor hybrid histidine kinase; COG0642 Signal transduction histidine kinase.
     
 0.750
KYG_22146
Multi-sensor hybrid histidine kinase; COG2202 FOG: PAS/PAC domain.
     
 0.750
KYG_07136
Transposase is4 family protein; COG3666 Transposase and inactivated derivatives.
       0.553
KYG_07146
Hypothetical protein.
       0.531
KYG_03990
LuxR family transcriptional regulator; COG2202 FOG: PAS/PAC domain.
  
 0.460
KYG_00537
Two component LuxR family transcriptional regulator; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
  
 0.452
KYG_02112
Two component LuxR family transcriptional regulator; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
  
 0.452
KYG_03546
Response regulator receiver protein; COG0784 FOG: CheY-like receiver.
  
 0.452
KYG_03551
Two component LuxR family transcriptional regulator; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
  
 0.452
KYG_07770
Two component LuxR family transcriptional regulator; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
  
 0.452
Your Current Organism:
Nocardioides sp. SLBN35
NCBI taxonomy Id: 512030
Other names: Acidovorax sp. NO1, N. sp. SLBN-35, Nocardioides sp. SLBN-35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.