Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KYG_01357 | KYG_07685 | KYG_01357 | KYG_07685 | COG0281 Malic enzyme. | AraC family transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins. | 0.564 |
KYG_01357 | KYG_07690 | KYG_01357 | KYG_07690 | COG0281 Malic enzyme. | COG2272 Carboxylesterase type B; Belongs to the type-B carboxylesterase/lipase family. | 0.663 |
KYG_01357 | KYG_11165 | KYG_01357 | KYG_11165 | COG0281 Malic enzyme. | COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit. | 0.993 |
KYG_01357 | KYG_11170 | KYG_01357 | KYG_11170 | COG0281 Malic enzyme. | COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit. | 0.993 |
KYG_01357 | KYG_11709 | KYG_01357 | KYG_11709 | COG0281 Malic enzyme. | COG0281 Malic enzyme. | 0.947 |
KYG_01357 | KYG_12624 | KYG_01357 | KYG_12624 | COG0281 Malic enzyme. | COG0067 Glutamate synthase domain 1. | 0.646 |
KYG_07675 | KYG_07685 | KYG_07675 | KYG_07685 | methionine-R-sulfoxide reductase; COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase; Belongs to the MsrB Met sulfoxide reductase family. | AraC family transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins. | 0.590 |
KYG_07675 | selO | KYG_07675 | KYG_07680 | methionine-R-sulfoxide reductase; COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase; Belongs to the MsrB Met sulfoxide reductase family. | Hypothetical protein; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). Belongs to the SELO family. | 0.885 |
KYG_07685 | KYG_01357 | KYG_07685 | KYG_01357 | AraC family transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins. | COG0281 Malic enzyme. | 0.564 |
KYG_07685 | KYG_07675 | KYG_07685 | KYG_07675 | AraC family transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins. | methionine-R-sulfoxide reductase; COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase; Belongs to the MsrB Met sulfoxide reductase family. | 0.590 |
KYG_07685 | KYG_07690 | KYG_07685 | KYG_07690 | AraC family transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins. | COG2272 Carboxylesterase type B; Belongs to the type-B carboxylesterase/lipase family. | 0.561 |
KYG_07685 | KYG_11165 | KYG_07685 | KYG_11165 | AraC family transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins. | COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit. | 0.744 |
KYG_07685 | KYG_11170 | KYG_07685 | KYG_11170 | AraC family transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins. | COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit. | 0.744 |
KYG_07685 | KYG_11709 | KYG_07685 | KYG_11709 | AraC family transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins. | COG0281 Malic enzyme. | 0.564 |
KYG_07685 | KYG_12624 | KYG_07685 | KYG_12624 | AraC family transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins. | COG0067 Glutamate synthase domain 1. | 0.664 |
KYG_07685 | ribB | KYG_07685 | KYG_17152 | AraC family transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins. | 3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | 0.621 |
KYG_07685 | rpoA | KYG_07685 | KYG_19411 | AraC family transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.623 |
KYG_07685 | selO | KYG_07685 | KYG_07680 | AraC family transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins. | Hypothetical protein; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). Belongs to the SELO family. | 0.595 |
KYG_07690 | KYG_01357 | KYG_07690 | KYG_01357 | COG2272 Carboxylesterase type B; Belongs to the type-B carboxylesterase/lipase family. | COG0281 Malic enzyme. | 0.663 |
KYG_07690 | KYG_07685 | KYG_07690 | KYG_07685 | COG2272 Carboxylesterase type B; Belongs to the type-B carboxylesterase/lipase family. | AraC family transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins. | 0.561 |
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