STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYG_08540Flagellar motor stator protein MotA; COG1291 Flagellar motor component. (286 aa)    
Predicted Functional Partners:
KYG_08545
Ompa/motb domain protein; COG1360 Flagellar motor protein.
 
 0.999
KYG_21099
COG1360 Flagellar motor protein.
  
 0.995
KYG_08460
COG1536 Flagellar motor switch protein.
 
 
 0.985
KYG_08465
Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
  
 0.985
KYG_08635
Flagellar l-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
  
 0.985
KYG_08605
COG1558 Flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family.
 
  
 0.983
fliP
Flagellar biosynthesis protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.
 
  
 0.975
KYG_08600
Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
  
 0.974
KYG_08425
COG1868 Flagellar motor switch protein.
 
 
 0.972
KYG_08655
COG1256 Flagellar hook-associated protein.
 
  
 0.972
Your Current Organism:
Nocardioides sp. SLBN35
NCBI taxonomy Id: 512030
Other names: Acidovorax sp. NO1, N. sp. SLBN-35, Nocardioides sp. SLBN-35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.