STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYG_09250COG3961 Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes; overlaps another CDS with the same product name. (365 aa)    
Predicted Functional Partners:
KYG_09245
COG3961 Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes; overlaps another CDS with the same product name.
     0.994
KYG_21594
COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes.
   
 
 0.712
KYG_01202
Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis.
   
 
 0.626
ilvH
COG0440 Acetolactate synthase, small (regulatory) subunit.
  
 
 0.620
pgi
COG0166 Glucose-6-phosphate isomerase; Belongs to the GPI family.
   
 
 0.606
KYG_09240
Putative DNA-binding transcriptional regulator; COG3550 Uncharacterized protein related to capsule biosynthesis enzymes.
       0.551
KYG_19306
COG1064 Zn-dependent alcohol dehydrogenases.
   
 
 0.549
KYG_01182
COG0469 Pyruvate kinase; Belongs to the pyruvate kinase family.
   
 
 0.546
KYG_01152
COG0021 Transketolase; Belongs to the transketolase family.
   
 
 0.528
KYG_21779
COG1454 Alcohol dehydrogenase, class IV.
  
 
 0.509
Your Current Organism:
Nocardioides sp. SLBN35
NCBI taxonomy Id: 512030
Other names: Acidovorax sp. NO1, N. sp. SLBN-35, Nocardioides sp. SLBN-35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.