STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYG_09255Anaerobic ribonucleoside-triphosphate reductase activating protein; COG1180 Pyruvate-formate lyase-activating enzyme. (215 aa)    
Predicted Functional Partners:
KYG_09260
Hypothetical protein.
 
  
 0.954
KYG_09265
COG1328 Oxygen-sensitive ribonucleoside-triphosphate reductase.
 
  
 0.916
KYG_21779
COG1454 Alcohol dehydrogenase, class IV.
  
  
 0.724
KYG_11165
COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit.
     
 0.628
KYG_11170
COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit.
     
 0.628
KYG_09595
Putative protease; COG0826 Collagenase and related proteases.
 
     0.517
KYG_20900
NAD(FAD)-dependent dehydrogenase; COG1773 Rubredoxin.
  
  
 0.509
KYG_00937
COG0209 Ribonucleotide reductase, alpha subunit.
  
  
 0.508
KYG_16395
Ribonucleotide-diphosphate reductase subunit alpha; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
  
  
 0.508
KYG_01357
COG0281 Malic enzyme.
  
  
 0.487
Your Current Organism:
Nocardioides sp. SLBN35
NCBI taxonomy Id: 512030
Other names: Acidovorax sp. NO1, N. sp. SLBN-35, Nocardioides sp. SLBN-35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.