STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYG_09335COG0589 Universal stress protein UspA and related nucleotide-binding proteins. (140 aa)    
Predicted Functional Partners:
KYG_03970
COG0589 Universal stress protein UspA and related nucleotide-binding proteins.
  
     0.737
KYG_17677
COG0589 Universal stress protein UspA and related nucleotide-binding proteins.
 
     0.736
KYG_15900
COG0589 Universal stress protein UspA and related nucleotide-binding proteins.
 
     0.686
KYG_09330
Metallophosphoesterase; COG1409 Predicted phosphohydrolases.
       0.673
KYG_19786
COG0589 Universal stress protein UspA and related nucleotide-binding proteins.
  
     0.608
KYG_09325
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
       0.478
KYG_09340
COG2335 Secreted and surface protein containing fasciclin-like repeats.
       0.458
Your Current Organism:
Nocardioides sp. SLBN35
NCBI taxonomy Id: 512030
Other names: Acidovorax sp. NO1, N. sp. SLBN-35, Nocardioides sp. SLBN-35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.