Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
KYG_09325 | KYG_09370 | COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | COG1309 Transcriptional regulator. | 0.421 |
KYG_09365 | KYG_09370 | Hypothetical protein. | COG1309 Transcriptional regulator. | 0.517 |
KYG_09365 | KYG_09375 | Hypothetical protein. | NADPH-dependent FMN reductase; COG0655 Multimeric flavodoxin WrbA. | 0.517 |
KYG_09370 | KYG_09325 | COG1309 Transcriptional regulator. | COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.421 |
KYG_09370 | KYG_09365 | COG1309 Transcriptional regulator. | Hypothetical protein. | 0.517 |
KYG_09370 | KYG_09375 | COG1309 Transcriptional regulator. | NADPH-dependent FMN reductase; COG0655 Multimeric flavodoxin WrbA. | 0.773 |
KYG_09370 | KYG_20440 | COG1309 Transcriptional regulator. | AraC family transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins. | 0.430 |
KYG_09370 | KYG_23430 | COG1309 Transcriptional regulator. | COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.494 |
KYG_09375 | KYG_09365 | NADPH-dependent FMN reductase; COG0655 Multimeric flavodoxin WrbA. | Hypothetical protein. | 0.517 |
KYG_09375 | KYG_09370 | NADPH-dependent FMN reductase; COG0655 Multimeric flavodoxin WrbA. | COG1309 Transcriptional regulator. | 0.773 |
KYG_20440 | KYG_09370 | AraC family transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins. | COG1309 Transcriptional regulator. | 0.430 |
KYG_23430 | KYG_09370 | COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | COG1309 Transcriptional regulator. | 0.494 |