STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYG_10920Hypothetical protein; COG2391 Predicted transporter component. (143 aa)    
Predicted Functional Partners:
KYG_10925
Hypothetical protein; COG2391 Predicted transporter component.
   
 0.969
KYG_01692
Putative transmembrane protein; COG2391 Predicted transporter component.
   
 0.819
KYG_10915
COG0640 Predicted transcriptional regulators.
       0.783
KYG_10935
COG0659 Sulfate permease and related transporters (MFS superfamily).
 
    0.714
KYG_10930
COG3453 Uncharacterized protein conserved in bacteria.
       0.700
KYG_10910
Metallo-beta-lactamase superfamily protein; COG0491 Zn-dependent hydrolases, including glyoxylases.
 
     0.680
KYG_00105
Sira family protein; COG0425 Predicted redox protein, regulator of disulfide bond formation; Belongs to the sulfur carrier protein TusA family.
  
  
 0.513
KYG_10905
Rhodanese domain-containing protein; COG0607 Rhodanese-related sulfurtransferase.
  
    0.507
cysC
Sulfate adenylyltransferase subunit 1 / adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate.
   
    0.474
Your Current Organism:
Nocardioides sp. SLBN35
NCBI taxonomy Id: 512030
Other names: Acidovorax sp. NO1, N. sp. SLBN-35, Nocardioides sp. SLBN-35
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.