STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYG_10960Hypothetical protein. (321 aa)    
Predicted Functional Partners:
KYG_01182
COG0469 Pyruvate kinase; Belongs to the pyruvate kinase family.
   
 0.604
KYG_02487
Family 2 glycosyl transferase; COG0500 SAM-dependent methyltransferases.
  
 0.561
KYG_22840
HAD family hydrolase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
  
 
 0.533
KYG_22830
Alpha,alpha-trehalose-phosphate synthase; Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-alpha-D- glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose- 6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor; Belongs to the glycosyltransferase 20 family.
    
  0.506
KYG_10955
Transposase, IS4; COG3039 Transposase and inactivated derivatives, IS5 family.
       0.503
KYG_10965
Cyclic nucleotide-binding domain-containing protein; COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases.
   
   0.499
KYG_02492
COG0438 Glycosyltransferase; overlaps another CDS with the same product name.
  
 0.423
KYG_02497
COG0438 Glycosyltransferase; overlaps another CDS with the same product name.
  
 0.423
KYG_04639
COG0438 Glycosyltransferase.
  
 0.423
KYG_06124
COG0438 Glycosyltransferase.
  
 0.423
Your Current Organism:
Nocardioides sp. SLBN35
NCBI taxonomy Id: 512030
Other names: Acidovorax sp. NO1, N. sp. SLBN-35, Nocardioides sp. SLBN-35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.