Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
KYG_02272 | KYG_11025 | Transposase IS3/IS911 family protein; COG2963 Transposase and inactivated derivatives. | Integrase catalytic subunit; COG2963 Transposase and inactivated derivatives. | 0.505 |
KYG_02272 | KYG_18094 | Transposase IS3/IS911 family protein; COG2963 Transposase and inactivated derivatives. | Integrase catalytic subunit; COG2801 Transposase and inactivated derivatives; overlaps another CDS with the same product name. | 0.532 |
KYG_04554 | KYG_11025 | COG2963 Transposase and inactivated derivatives. | Integrase catalytic subunit; COG2963 Transposase and inactivated derivatives. | 0.681 |
KYG_11020 | KYG_11025 | Hypothetical protein; COG2217 Cation transport ATPase. | Integrase catalytic subunit; COG2963 Transposase and inactivated derivatives. | 0.553 |
KYG_11025 | KYG_02272 | Integrase catalytic subunit; COG2963 Transposase and inactivated derivatives. | Transposase IS3/IS911 family protein; COG2963 Transposase and inactivated derivatives. | 0.505 |
KYG_11025 | KYG_04554 | Integrase catalytic subunit; COG2963 Transposase and inactivated derivatives. | COG2963 Transposase and inactivated derivatives. | 0.681 |
KYG_11025 | KYG_11020 | Integrase catalytic subunit; COG2963 Transposase and inactivated derivatives. | Hypothetical protein; COG2217 Cation transport ATPase. | 0.553 |
KYG_11025 | KYG_18094 | Integrase catalytic subunit; COG2963 Transposase and inactivated derivatives. | Integrase catalytic subunit; COG2801 Transposase and inactivated derivatives; overlaps another CDS with the same product name. | 0.713 |
KYG_18094 | KYG_02272 | Integrase catalytic subunit; COG2801 Transposase and inactivated derivatives; overlaps another CDS with the same product name. | Transposase IS3/IS911 family protein; COG2963 Transposase and inactivated derivatives. | 0.532 |
KYG_18094 | KYG_11025 | Integrase catalytic subunit; COG2801 Transposase and inactivated derivatives; overlaps another CDS with the same product name. | Integrase catalytic subunit; COG2963 Transposase and inactivated derivatives. | 0.713 |