STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYG_11669COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family. (267 aa)    
Predicted Functional Partners:
KYG_23420
COG4631 Xanthine dehydrogenase, molybdopterin-binding subunit B.
 
  
 0.925
KYG_11664
COG3748 Predicted membrane protein.
 
     0.881
KYG_23425
COG4630 Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A.
 
  
 0.848
KYG_23475
Guanine deaminase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family.
 
    0.788
KYG_11679
Hydroxyisourate hydrolase; COG2351 Transthyretin-like protein; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
 
     0.767
KYG_11689
COG0726 Predicted xylanase/chitin deacetylase.
 
     0.731
KYG_09020
COG1319 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs.
 
 
 0.715
KYG_21154
Hypothetical protein; COG2068 Uncharacterized MobA-related protein.
  
 
 0.704
KYG_00290
Fis family transcriptional regulator; COG1319 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs.
 
 
 0.665
KYG_19123
Putative oxidoreductase; COG1319 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs.
  
 
 0.603
Your Current Organism:
Nocardioides sp. SLBN35
NCBI taxonomy Id: 512030
Other names: Acidovorax sp. NO1, N. sp. SLBN-35, Nocardioides sp. SLBN-35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.