STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYG_11814COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. (356 aa)    
Predicted Functional Partners:
KYG_11819
Integral membrane sensor hybrid histidine kinase; COG0642 Signal transduction histidine kinase.
 
 0.987
KYG_10885
PAS/PAC sensor hybrid histidine kinase; COG0642 Signal transduction histidine kinase.
 
0.985
KYG_19551
Sensor histidine kinase/response regulator; COG0642 Signal transduction histidine kinase.
0.984
KYG_22146
Multi-sensor hybrid histidine kinase; COG2202 FOG: PAS/PAC domain.
 
0.982
KYG_13061
PAS/PAC sensor signal transduction histidine kinase; COG2202 FOG: PAS/PAC domain.
 
 0.943
KYG_03191
COG2203 FOG: GAF domain.
 
 0.930
KYG_18244
Diguanylate cyclase; COG2199 FOG: GGDEF domain.
 
 
 
  0.906
KYG_06154
COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain.
 
 
0.891
KYG_15855
Signal transduction histidine kinase, nitrogen specific, ntrb; COG0642 Signal transduction histidine kinase.
 
 0.873
KYG_02107
COG0642 Signal transduction histidine kinase.
 
 0.845
Your Current Organism:
Nocardioides sp. SLBN35
NCBI taxonomy Id: 512030
Other names: Acidovorax sp. NO1, N. sp. SLBN-35, Nocardioides sp. SLBN-35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.