Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KYG_12534 | KYG_12539 | KYG_12534 | KYG_12539 | PilT domain-containing protein; COG5573 Predicted nucleic-acid-binding protein, contains PIN domain. | Hypothetical protein. | 0.788 |
KYG_12534 | KYG_12544 | KYG_12534 | KYG_12544 | PilT domain-containing protein; COG5573 Predicted nucleic-acid-binding protein, contains PIN domain. | Hypothetical protein. | 0.552 |
KYG_12534 | hisA | KYG_12534 | KYG_12514 | PilT domain-containing protein; COG5573 Predicted nucleic-acid-binding protein, contains PIN domain. | COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase. | 0.431 |
KYG_12534 | hisB | KYG_12534 | KYG_12524 | PilT domain-containing protein; COG5573 Predicted nucleic-acid-binding protein, contains PIN domain. | COG0131 Imidazoleglycerol-phosphate dehydratase. | 0.587 |
KYG_12534 | hisC | KYG_12534 | KYG_12529 | PilT domain-containing protein; COG5573 Predicted nucleic-acid-binding protein, contains PIN domain. | COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.718 |
KYG_12534 | hisH | KYG_12534 | KYG_12519 | PilT domain-containing protein; COG5573 Predicted nucleic-acid-binding protein, contains PIN domain. | Imidazole glycerol phosphate synthase subunit HisH; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF. | 0.456 |
KYG_12539 | KYG_12534 | KYG_12539 | KYG_12534 | Hypothetical protein. | PilT domain-containing protein; COG5573 Predicted nucleic-acid-binding protein, contains PIN domain. | 0.788 |
KYG_12539 | KYG_12544 | KYG_12539 | KYG_12544 | Hypothetical protein. | Hypothetical protein. | 0.570 |
KYG_12539 | hisB | KYG_12539 | KYG_12524 | Hypothetical protein. | COG0131 Imidazoleglycerol-phosphate dehydratase. | 0.571 |
KYG_12539 | hisC | KYG_12539 | KYG_12529 | Hypothetical protein. | COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.612 |
KYG_12539 | hisH | KYG_12539 | KYG_12519 | Hypothetical protein. | Imidazole glycerol phosphate synthase subunit HisH; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF. | 0.420 |
KYG_12544 | KYG_12534 | KYG_12544 | KYG_12534 | Hypothetical protein. | PilT domain-containing protein; COG5573 Predicted nucleic-acid-binding protein, contains PIN domain. | 0.552 |
KYG_12544 | KYG_12539 | KYG_12544 | KYG_12539 | Hypothetical protein. | Hypothetical protein. | 0.570 |
KYG_12544 | hisC | KYG_12544 | KYG_12529 | Hypothetical protein. | COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.436 |
hisA | KYG_12534 | KYG_12514 | KYG_12534 | COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase. | PilT domain-containing protein; COG5573 Predicted nucleic-acid-binding protein, contains PIN domain. | 0.431 |
hisA | hisB | KYG_12514 | KYG_12524 | COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase. | COG0131 Imidazoleglycerol-phosphate dehydratase. | 0.997 |
hisA | hisC | KYG_12514 | KYG_12529 | COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase. | COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.962 |
hisA | hisH | KYG_12514 | KYG_12519 | COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase. | Imidazole glycerol phosphate synthase subunit HisH; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF. | 0.999 |
hisB | KYG_12534 | KYG_12524 | KYG_12534 | COG0131 Imidazoleglycerol-phosphate dehydratase. | PilT domain-containing protein; COG5573 Predicted nucleic-acid-binding protein, contains PIN domain. | 0.587 |
hisB | KYG_12539 | KYG_12524 | KYG_12539 | COG0131 Imidazoleglycerol-phosphate dehydratase. | Hypothetical protein. | 0.571 |
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