STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYG_13071Twin-arginine translocation pathway signal protein; COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components. (468 aa)    
Predicted Functional Partners:
KYG_13076
Nitrate ABC transporter, inner membrane subunit; COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
 
 
 0.998
KYG_13081
ABC transporter-like protein; COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component.
 
 0.987
KYG_21971
COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component.
 
 0.970
KYG_21966
Nitrate ABC transporter, inner membrane subunit; COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
 
 
 0.952
KYG_21961
Twin-arginine translocation pathway signal protein; COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components.
  
  
 
0.834
cynS
Cyanate hydratase; Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide; Belongs to the cyanase family.
 
   
 0.830
KYG_02027
COG2181 Nitrate reductase gamma subunit.
     
 0.802
KYG_02037
COG1140 Nitrate reductase beta subunit.
     
 0.802
KYG_02042
COG5013 Nitrate reductase alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
     
 0.801
KYG_14938
Taurine-transporting ATPase; COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component.
 
 0.769
Your Current Organism:
Nocardioides sp. SLBN35
NCBI taxonomy Id: 512030
Other names: Acidovorax sp. NO1, N. sp. SLBN-35, Nocardioides sp. SLBN-35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.