Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
KYG_01367 | KYG_04350 | Barstar (barnase inhibitor). | COG2916 DNA-binding protein H-NS. | 0.760 |
KYG_01367 | KYG_05769 | Barstar (barnase inhibitor). | Putative lipoprotein. | 0.733 |
KYG_01367 | KYG_11499 | Barstar (barnase inhibitor). | COG2314 Predicted membrane protein. | 0.752 |
KYG_01367 | KYG_13366 | Barstar (barnase inhibitor). | RDD domain-containing protein; COG1714 Predicted membrane protein/domain. | 0.584 |
KYG_01367 | KYG_13371 | Barstar (barnase inhibitor). | Hypothetical protein. | 0.440 |
KYG_01367 | KYG_13376 | Barstar (barnase inhibitor). | Hypothetical protein. | 0.732 |
KYG_01367 | KYG_22960 | Barstar (barnase inhibitor). | GCN5-like N-acetyltransferase; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases. | 0.746 |
KYG_04350 | KYG_01367 | COG2916 DNA-binding protein H-NS. | Barstar (barnase inhibitor). | 0.760 |
KYG_04350 | KYG_05769 | COG2916 DNA-binding protein H-NS. | Putative lipoprotein. | 0.684 |
KYG_04350 | KYG_11499 | COG2916 DNA-binding protein H-NS. | COG2314 Predicted membrane protein. | 0.683 |
KYG_04350 | KYG_13371 | COG2916 DNA-binding protein H-NS. | Hypothetical protein. | 0.518 |
KYG_04350 | KYG_13376 | COG2916 DNA-binding protein H-NS. | Hypothetical protein. | 0.750 |
KYG_04350 | KYG_13381 | COG2916 DNA-binding protein H-NS. | COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily. | 0.429 |
KYG_04350 | KYG_22960 | COG2916 DNA-binding protein H-NS. | GCN5-like N-acetyltransferase; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases. | 0.595 |
KYG_05769 | KYG_01367 | Putative lipoprotein. | Barstar (barnase inhibitor). | 0.733 |
KYG_05769 | KYG_04350 | Putative lipoprotein. | COG2916 DNA-binding protein H-NS. | 0.684 |
KYG_05769 | KYG_11499 | Putative lipoprotein. | COG2314 Predicted membrane protein. | 0.504 |
KYG_05769 | KYG_13371 | Putative lipoprotein. | Hypothetical protein. | 0.721 |
KYG_05769 | KYG_13376 | Putative lipoprotein. | Hypothetical protein. | 0.715 |
KYG_05769 | KYG_14603 | Putative lipoprotein. | General secretion pathway L. | 0.479 |
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