STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYG_13671COG1960 Acyl-CoA dehydrogenases. (389 aa)    
Predicted Functional Partners:
KYG_13686
COG1024 Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
  0.817
KYG_13486
COG1960 Acyl-CoA dehydrogenases.
  
  
  0.809
KYG_13661
Acyl-CoA dehydrogenase-like protein; COG1960 Acyl-CoA dehydrogenases.
 
  
  0.795
KYG_05379
3-hydroxyacyl-CoA dehydrogenase; COG1024 Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.789
KYG_13506
Fatty oxidation complex subunit alpha; COG1024 Enoyl-CoA hydratase/carnithine racemase.
  
 0.789
KYG_13676
COG2079 Uncharacterized protein involved in propionate catabolism.
  
    0.776
KYG_11165
COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit.
  
 
 0.756
KYG_11170
COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit.
  
 
 0.756
KYG_02542
COG1250 3-hydroxyacyl-CoA dehydrogenase.
  
 0.739
KYG_07735
3-hydroxyacyl-CoA dehydrogenase NAD-binding; COG1024 Enoyl-CoA hydratase/carnithine racemase.
  
 0.739
Your Current Organism:
Nocardioides sp. SLBN35
NCBI taxonomy Id: 512030
Other names: Acidovorax sp. NO1, N. sp. SLBN-35, Nocardioides sp. SLBN-35
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.