STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYG_14081Short-chain dehydrogenase/reductase SDR; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases). (293 aa)    
Predicted Functional Partners:
KYG_14086
COG1305 Transglutaminase-like enzymes, putative cysteine proteases.
 
     0.815
KYG_00025
COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases.
 
 0.791
KYG_12624
COG0067 Glutamate synthase domain 1.
     
 0.787
KYG_11165
COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit.
    
 0.765
KYG_11170
COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit.
    
 0.765
KYG_14076
Thioesterase superfamily protein; COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism; overlaps another CDS with the same product name.
 
    0.733
KYG_14071
Thioesterase superfamily protein; COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism; overlaps another CDS with the same product name.
 
    0.732
KYG_14066
Beta-lactamase-like protein; COG0491 Zn-dependent hydrolases, including glyoxylases.
   
  0.709
KYG_06244
COG0331 (acyl-carrier-protein) S-malonyltransferase.
 0.683
KYG_06304
Putative ring-hydroxylation complex protein 4; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
   
 0.674
Your Current Organism:
Nocardioides sp. SLBN35
NCBI taxonomy Id: 512030
Other names: Acidovorax sp. NO1, N. sp. SLBN-35, Nocardioides sp. SLBN-35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.