STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYG_14273Hypothetical protein. (190 aa)    
Predicted Functional Partners:
KYG_14268
Hypothetical protein.
       0.610
KYG_05504
Serine/threonine protein kinase, bacterial; COG4252 Predicted transmembrane sensor domain.
  
 
 0.536
KYG_14278
UbiE/COQ5 family methyltransferase; COG0500 SAM-dependent methyltransferases.
       0.510
KYG_00602
COG0121 Predicted glutamine amidotransferase.
  
 
 0.484
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
  0.478
KYG_07246
Methyltransferase.
  
 
 0.473
KYG_07251
Hypothetical protein.
  
 
 0.473
KYG_22016
COG0631 Serine/threonine protein phosphatase.
  
 
 0.411
KYG_01037
Adenylate/guanylate cyclase with Chase sensor; COG4252 Predicted transmembrane sensor domain.
    
  0.405
KYG_05519
Adenylate/guanylate cyclase with chase sensor; COG4252 Predicted transmembrane sensor domain.
    
  0.405
Your Current Organism:
Nocardioides sp. SLBN35
NCBI taxonomy Id: 512030
Other names: Acidovorax sp. NO1, N. sp. SLBN-35, Nocardioides sp. SLBN-35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.