STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYG_14458Cobalt chelatase subunit CobS; COG0714 MoxR-like ATPases. (116 aa)    
Predicted Functional Partners:
KYG_17582
COG1797 Cobyrinic acid a,c-diamide synthase.
     
 0.906
KYG_17547
Cobaltochelatase subunit CobN; COG1429 Cobalamin biosynthesis protein CobN and related Mg-chelatases.
     
 0.812
KYG_09275
COG3256 Nitric oxide reductase large subunit.
  
  
 0.810
KYG_14463
COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
       0.620
KYG_23540
Parallel beta-helix repeat-containing protein; COG3420 Nitrous oxidase accessory protein.
   
    0.570
KYG_04380
COG1982 Arginine/lysine/ornithine decarboxylases.
    
 
 0.549
KYG_12229
COG3741 N-formylglutamate amidohydrolase.
  
     0.536
KYG_23550
COG4263 Nitrous oxide reductase.
   
  
 0.531
KYG_23545
Fmn-binding domain-containing protein; COG3901 Regulator of nitric oxide reductase transcription.
   
  
 0.501
KYG_18556
COG5319 Uncharacterized protein conserved in bacteria.
  
     0.472
Your Current Organism:
Nocardioides sp. SLBN35
NCBI taxonomy Id: 512030
Other names: Acidovorax sp. NO1, N. sp. SLBN-35, Nocardioides sp. SLBN-35
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