Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
KYG_04380 | KYG_14458 | COG1982 Arginine/lysine/ornithine decarboxylases. | Cobalt chelatase subunit CobS; COG0714 MoxR-like ATPases. | 0.549 |
KYG_09275 | KYG_14458 | COG3256 Nitric oxide reductase large subunit. | Cobalt chelatase subunit CobS; COG0714 MoxR-like ATPases. | 0.810 |
KYG_09275 | KYG_23540 | COG3256 Nitric oxide reductase large subunit. | Parallel beta-helix repeat-containing protein; COG3420 Nitrous oxidase accessory protein. | 0.773 |
KYG_09275 | KYG_23545 | COG3256 Nitric oxide reductase large subunit. | Fmn-binding domain-containing protein; COG3901 Regulator of nitric oxide reductase transcription. | 0.975 |
KYG_09275 | KYG_23550 | COG3256 Nitric oxide reductase large subunit. | COG4263 Nitrous oxide reductase. | 0.986 |
KYG_12229 | KYG_14458 | COG3741 N-formylglutamate amidohydrolase. | Cobalt chelatase subunit CobS; COG0714 MoxR-like ATPases. | 0.536 |
KYG_14458 | KYG_04380 | Cobalt chelatase subunit CobS; COG0714 MoxR-like ATPases. | COG1982 Arginine/lysine/ornithine decarboxylases. | 0.549 |
KYG_14458 | KYG_09275 | Cobalt chelatase subunit CobS; COG0714 MoxR-like ATPases. | COG3256 Nitric oxide reductase large subunit. | 0.810 |
KYG_14458 | KYG_12229 | Cobalt chelatase subunit CobS; COG0714 MoxR-like ATPases. | COG3741 N-formylglutamate amidohydrolase. | 0.536 |
KYG_14458 | KYG_14463 | Cobalt chelatase subunit CobS; COG0714 MoxR-like ATPases. | COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily). | 0.620 |
KYG_14458 | KYG_17547 | Cobalt chelatase subunit CobS; COG0714 MoxR-like ATPases. | Cobaltochelatase subunit CobN; COG1429 Cobalamin biosynthesis protein CobN and related Mg-chelatases. | 0.812 |
KYG_14458 | KYG_17582 | Cobalt chelatase subunit CobS; COG0714 MoxR-like ATPases. | COG1797 Cobyrinic acid a,c-diamide synthase. | 0.906 |
KYG_14458 | KYG_18556 | Cobalt chelatase subunit CobS; COG0714 MoxR-like ATPases. | COG5319 Uncharacterized protein conserved in bacteria. | 0.472 |
KYG_14458 | KYG_23540 | Cobalt chelatase subunit CobS; COG0714 MoxR-like ATPases. | Parallel beta-helix repeat-containing protein; COG3420 Nitrous oxidase accessory protein. | 0.570 |
KYG_14458 | KYG_23545 | Cobalt chelatase subunit CobS; COG0714 MoxR-like ATPases. | Fmn-binding domain-containing protein; COG3901 Regulator of nitric oxide reductase transcription. | 0.501 |
KYG_14458 | KYG_23550 | Cobalt chelatase subunit CobS; COG0714 MoxR-like ATPases. | COG4263 Nitrous oxide reductase. | 0.531 |
KYG_14463 | KYG_14458 | COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily). | Cobalt chelatase subunit CobS; COG0714 MoxR-like ATPases. | 0.620 |
KYG_17547 | KYG_14458 | Cobaltochelatase subunit CobN; COG1429 Cobalamin biosynthesis protein CobN and related Mg-chelatases. | Cobalt chelatase subunit CobS; COG0714 MoxR-like ATPases. | 0.812 |
KYG_17547 | KYG_17582 | Cobaltochelatase subunit CobN; COG1429 Cobalamin biosynthesis protein CobN and related Mg-chelatases. | COG1797 Cobyrinic acid a,c-diamide synthase. | 0.990 |
KYG_17582 | KYG_14458 | COG1797 Cobyrinic acid a,c-diamide synthase. | Cobalt chelatase subunit CobS; COG0714 MoxR-like ATPases. | 0.906 |
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