STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYG_14588General secretion pathway protein D; COG1450 Type II secretory pathway, component PulD. (725 aa)    
Predicted Functional Partners:
KYG_14633
Hypothetical protein.
  
 
 0.963
KYG_14583
COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB.
 
  
 0.943
KYG_14628
General secretion pathway protein g; COG2165 Type II secretory pathway, pseudopilin PulG.
  
 0.888
KYG_14593
Putative general secretory pathway N transmembrane protein.
 
   
 0.879
KYG_14608
General secretion pathway protein K; COG3156 Type II secretory pathway, component PulK.
 
   
 0.874
KYG_02442
General secretion pathway protein D; COG1450 Type II secretory pathway, component PulD.
  
  
 
0.870
KYG_14618
General secretion pathway protein I; COG2165 Type II secretory pathway, pseudopilin PulG.
 
  
 0.866
KYG_10175
General secretion pathway protein F; COG1459 Type II secretory pathway, component PulF.
 
  
 0.822
KYG_02402
General secretion pathway protein G; COG2165 Type II secretory pathway, pseudopilin PulG.
 
  
 0.816
KYG_14603
General secretion pathway L.
 
  
 0.809
Your Current Organism:
Nocardioides sp. SLBN35
NCBI taxonomy Id: 512030
Other names: Acidovorax sp. NO1, N. sp. SLBN-35, Nocardioides sp. SLBN-35
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.