STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYG_14688COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components. (303 aa)    
Predicted Functional Partners:
KYG_14693
COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
 0.999
KYG_14698
Oligopeptide/dipeptide ABC transporter ATPase subunit; COG4608 ABC-type oligopeptide transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
 0.999
KYG_12049
COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
 0.997
KYG_12039
COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 0.985
KYG_14703
Family 5 extracellular solute-binding protein; COG0747 ABC-type dipeptide transport system, periplasmic component.
 
 0.976
KYG_14683
Extracellular solute-binding protein; COG0747 ABC-type dipeptide transport system, periplasmic component.
 
 0.974
KYG_14673
COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
0.970
KYG_12054
ABC transporter-like protein; COG4608 ABC-type oligopeptide transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
 0.969
KYG_14668
Family 5 extracellular solute-binding protein; COG0747 ABC-type dipeptide transport system, periplasmic component.
 
 0.963
KYG_04684
Extracellular solute-binding protein; COG0747 ABC-type dipeptide transport system, periplasmic component.
 
 0.952
Your Current Organism:
Nocardioides sp. SLBN35
NCBI taxonomy Id: 512030
Other names: Acidovorax sp. NO1, N. sp. SLBN-35, Nocardioides sp. SLBN-35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.