Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KYG_02842 | KYG_16802 | KYG_02842 | KYG_16802 | Hypothetical protein; COG0457 FOG: TPR repeat. | 17 kDa surface antigen. | 0.417 |
KYG_03546 | KYG_16802 | KYG_03546 | KYG_16802 | Response regulator receiver protein; COG0784 FOG: CheY-like receiver. | 17 kDa surface antigen. | 0.427 |
KYG_16802 | KYG_02842 | KYG_16802 | KYG_02842 | 17 kDa surface antigen. | Hypothetical protein; COG0457 FOG: TPR repeat. | 0.417 |
KYG_16802 | KYG_03546 | KYG_16802 | KYG_03546 | 17 kDa surface antigen. | Response regulator receiver protein; COG0784 FOG: CheY-like receiver. | 0.427 |
KYG_16802 | KYG_16812 | KYG_16802 | KYG_16812 | 17 kDa surface antigen. | Hypothetical protein. | 0.457 |
KYG_16802 | KYG_20730 | KYG_16802 | KYG_20730 | 17 kDa surface antigen. | Exonuclease-like protein; COG2887 RecB family exonuclease. | 0.419 |
KYG_16802 | bamA | KYG_16802 | KYG_20500 | 17 kDa surface antigen. | Outer membrane protein assembly complex, YaeT protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.709 |
KYG_16802 | dut | KYG_16802 | KYG_16807 | 17 kDa surface antigen. | Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family. | 0.538 |
KYG_16802 | ihfA | KYG_16802 | KYG_06694 | 17 kDa surface antigen. | Integration host factor subunit alpha; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family. | 0.439 |
KYG_16812 | KYG_16802 | KYG_16812 | KYG_16802 | Hypothetical protein. | 17 kDa surface antigen. | 0.457 |
KYG_16812 | dut | KYG_16812 | KYG_16807 | Hypothetical protein. | Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family. | 0.783 |
KYG_20730 | KYG_16802 | KYG_20730 | KYG_16802 | Exonuclease-like protein; COG2887 RecB family exonuclease. | 17 kDa surface antigen. | 0.419 |
bamA | KYG_16802 | KYG_20500 | KYG_16802 | Outer membrane protein assembly complex, YaeT protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 17 kDa surface antigen. | 0.709 |
dut | KYG_16802 | KYG_16807 | KYG_16802 | Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family. | 17 kDa surface antigen. | 0.538 |
dut | KYG_16812 | KYG_16807 | KYG_16812 | Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family. | Hypothetical protein. | 0.783 |
ihfA | KYG_16802 | KYG_06694 | KYG_16802 | Integration host factor subunit alpha; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family. | 17 kDa surface antigen. | 0.439 |