Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
KYG_01987 | KYG_02002 | Hemerythrin HHE cation-binding domain-containing protein. | Nnrs family protein. | 0.645 |
KYG_01987 | KYG_16997 | Hemerythrin HHE cation-binding domain-containing protein. | Hypothetical protein. | 0.585 |
KYG_02002 | KYG_01987 | Nnrs family protein. | Hemerythrin HHE cation-binding domain-containing protein. | 0.645 |
KYG_02002 | KYG_16997 | Nnrs family protein. | Hypothetical protein. | 0.567 |
KYG_02002 | KYG_21069 | Nnrs family protein. | Hypothetical protein; COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component. | 0.581 |
KYG_12624 | KYG_16997 | COG0067 Glutamate synthase domain 1. | Hypothetical protein. | 0.469 |
KYG_12624 | KYG_17012 | COG0067 Glutamate synthase domain 1. | Hypothetical protein. | 0.469 |
KYG_16997 | KYG_01987 | Hypothetical protein. | Hemerythrin HHE cation-binding domain-containing protein. | 0.585 |
KYG_16997 | KYG_02002 | Hypothetical protein. | Nnrs family protein. | 0.567 |
KYG_16997 | KYG_12624 | Hypothetical protein. | COG0067 Glutamate synthase domain 1. | 0.469 |
KYG_16997 | KYG_17002 | Hypothetical protein. | COG1959 Predicted transcriptional regulator. | 0.538 |
KYG_16997 | KYG_17007 | Hypothetical protein. | NnrS; COG3213 Uncharacterized protein involved in response to NO. | 0.407 |
KYG_16997 | KYG_17012 | Hypothetical protein. | Hypothetical protein. | 0.522 |
KYG_16997 | KYG_21069 | Hypothetical protein. | Hypothetical protein; COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component. | 0.416 |
KYG_17002 | KYG_16997 | COG1959 Predicted transcriptional regulator. | Hypothetical protein. | 0.538 |
KYG_17002 | KYG_17007 | COG1959 Predicted transcriptional regulator. | NnrS; COG3213 Uncharacterized protein involved in response to NO. | 0.668 |
KYG_17002 | KYG_17012 | COG1959 Predicted transcriptional regulator. | Hypothetical protein. | 0.506 |
KYG_17007 | KYG_16997 | NnrS; COG3213 Uncharacterized protein involved in response to NO. | Hypothetical protein. | 0.407 |
KYG_17007 | KYG_17002 | NnrS; COG3213 Uncharacterized protein involved in response to NO. | COG1959 Predicted transcriptional regulator. | 0.668 |
KYG_17007 | KYG_17012 | NnrS; COG3213 Uncharacterized protein involved in response to NO. | Hypothetical protein. | 0.665 |
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