Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
KYG_01487 | KYG_01502 | Hypothetical protein. | Multicopper oxidase type 3. | 0.898 |
KYG_01487 | KYG_06736 | Hypothetical protein. | Putative copper resistance-like lipoprotein. | 0.823 |
KYG_01487 | KYG_06741 | Hypothetical protein. | COG2132 Putative multicopper oxidases. | 0.785 |
KYG_01487 | KYG_06746 | Hypothetical protein. | Blue (type 1) copper domain protein. | 0.470 |
KYG_01487 | KYG_17302 | Hypothetical protein. | Multicopper oxidase type 3. | 0.787 |
KYG_01487 | KYG_17307 | Hypothetical protein. | Blue (type1) copper domain-containing protein; COG4454 Uncharacterized copper-binding protein. | 0.766 |
KYG_01502 | KYG_01487 | Multicopper oxidase type 3. | Hypothetical protein. | 0.898 |
KYG_01502 | KYG_06731 | Multicopper oxidase type 3. | Hypothetical protein. | 0.786 |
KYG_01502 | KYG_06736 | Multicopper oxidase type 3. | Putative copper resistance-like lipoprotein. | 0.785 |
KYG_01502 | KYG_06746 | Multicopper oxidase type 3. | Blue (type 1) copper domain protein. | 0.762 |
KYG_01502 | KYG_13156 | Multicopper oxidase type 3. | Hypothetical protein. | 0.785 |
KYG_01502 | KYG_17307 | Multicopper oxidase type 3. | Blue (type1) copper domain-containing protein; COG4454 Uncharacterized copper-binding protein. | 0.879 |
KYG_01502 | KYG_17317 | Multicopper oxidase type 3. | Hypothetical protein. | 0.784 |
KYG_06731 | KYG_01502 | Hypothetical protein. | Multicopper oxidase type 3. | 0.786 |
KYG_06731 | KYG_06736 | Hypothetical protein. | Putative copper resistance-like lipoprotein. | 0.822 |
KYG_06731 | KYG_06741 | Hypothetical protein. | COG2132 Putative multicopper oxidases. | 0.785 |
KYG_06731 | KYG_17302 | Hypothetical protein. | Multicopper oxidase type 3. | 0.786 |
KYG_06731 | KYG_17307 | Hypothetical protein. | Blue (type1) copper domain-containing protein; COG4454 Uncharacterized copper-binding protein. | 0.755 |
KYG_06736 | KYG_01487 | Putative copper resistance-like lipoprotein. | Hypothetical protein. | 0.823 |
KYG_06736 | KYG_01502 | Putative copper resistance-like lipoprotein. | Multicopper oxidase type 3. | 0.785 |
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