STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYG_17652COG4736 Cbb3-type cytochrome oxidase, subunit 3. (45 aa)    
Predicted Functional Partners:
KYG_17657
COG2993 Cbb3-type cytochrome oxidase, cytochrome c subunit.
  
 
 0.998
KYG_17662
COG3278 Cbb3-type cytochrome oxidase, subunit 1; Belongs to the heme-copper respiratory oxidase family.
  
 
 0.997
KYG_17647
Cbb3-type cytochrome c oxidase subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
  
 0.996
KYG_03396
Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
  
 0.949
KYG_03421
COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3.
     
 0.835
ctaB
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
     
 0.823
KYG_17667
Cytochrome oxidase maturation protein, cbb3-type; COG3197 Uncharacterized protein, possibly involved in nitrogen fixation.
  
 
 0.817
KYG_17642
COG0348 Polyferredoxin.
  
  
 0.781
KYG_01462
COG2010 Cytochrome c, mono- and diheme variants.
  
 0.729
KYG_04155
COG2010 Cytochrome c, mono- and diheme variants.
  
 0.729
Your Current Organism:
Nocardioides sp. SLBN35
NCBI taxonomy Id: 512030
Other names: Acidovorax sp. NO1, N. sp. SLBN-35, Nocardioides sp. SLBN-35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.