STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYG_17667Cytochrome oxidase maturation protein, cbb3-type; COG3197 Uncharacterized protein, possibly involved in nitrogen fixation. (45 aa)    
Predicted Functional Partners:
KYG_17672
Heavy metal translocating P-type ATPase; COG2217 Cation transport ATPase.
  
  
 0.884
KYG_17652
COG4736 Cbb3-type cytochrome oxidase, subunit 3.
  
 
 0.817
KYG_17662
COG3278 Cbb3-type cytochrome oxidase, subunit 1; Belongs to the heme-copper respiratory oxidase family.
    
 0.794
KYG_17657
COG2993 Cbb3-type cytochrome oxidase, cytochrome c subunit.
  
 
 0.786
KYG_17647
Cbb3-type cytochrome c oxidase subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
 
 
 0.764
KYG_04519
Putative signal peptide protein.
  
     0.718
KYG_20420
Hypothetical protein.
  
     0.671
KYG_17642
COG0348 Polyferredoxin.
 
  
 0.661
KYG_05474
COG1846 Transcriptional regulators.
  
     0.645
KYG_03396
Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
  
 
 0.640
Your Current Organism:
Nocardioides sp. SLBN35
NCBI taxonomy Id: 512030
Other names: Acidovorax sp. NO1, N. sp. SLBN-35, Nocardioides sp. SLBN-35
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