Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
KYG_00997 | KYG_18009 | Hypothetical protein. | Asma family protein; COG2982 Uncharacterized protein involved in outer membrane biogenesis. | 0.573 |
KYG_04614 | KYG_05174 | Hypothetical protein; COG0477 Permeases of the major facilitator superfamily. | Lysylphosphatidylglycerol synthetase/UPF0104; COG0392 Predicted integral membrane protein. | 0.455 |
KYG_04614 | KYG_18009 | Hypothetical protein; COG0477 Permeases of the major facilitator superfamily. | Asma family protein; COG2982 Uncharacterized protein involved in outer membrane biogenesis. | 0.503 |
KYG_04929 | KYG_05174 | COG1629 Outer membrane receptor proteins, mostly Fe transport. | Lysylphosphatidylglycerol synthetase/UPF0104; COG0392 Predicted integral membrane protein. | 0.517 |
KYG_04929 | KYG_18009 | COG1629 Outer membrane receptor proteins, mostly Fe transport. | Asma family protein; COG2982 Uncharacterized protein involved in outer membrane biogenesis. | 0.413 |
KYG_05174 | KYG_04614 | Lysylphosphatidylglycerol synthetase/UPF0104; COG0392 Predicted integral membrane protein. | Hypothetical protein; COG0477 Permeases of the major facilitator superfamily. | 0.455 |
KYG_05174 | KYG_04929 | Lysylphosphatidylglycerol synthetase/UPF0104; COG0392 Predicted integral membrane protein. | COG1629 Outer membrane receptor proteins, mostly Fe transport. | 0.517 |
KYG_05174 | KYG_18009 | Lysylphosphatidylglycerol synthetase/UPF0104; COG0392 Predicted integral membrane protein. | Asma family protein; COG2982 Uncharacterized protein involved in outer membrane biogenesis. | 0.473 |
KYG_07815 | KYG_18009 | Hypothetical protein. | Asma family protein; COG2982 Uncharacterized protein involved in outer membrane biogenesis. | 0.458 |
KYG_07815 | KYG_19896 | Hypothetical protein. | PsiF repeat-containing protein. | 0.426 |
KYG_15780 | KYG_18009 | Hypothetical protein. | Asma family protein; COG2982 Uncharacterized protein involved in outer membrane biogenesis. | 0.460 |
KYG_16862 | KYG_18009 | COG2833 Uncharacterized protein conserved in bacteria. | Asma family protein; COG2982 Uncharacterized protein involved in outer membrane biogenesis. | 0.412 |
KYG_18009 | KYG_00997 | Asma family protein; COG2982 Uncharacterized protein involved in outer membrane biogenesis. | Hypothetical protein. | 0.573 |
KYG_18009 | KYG_04614 | Asma family protein; COG2982 Uncharacterized protein involved in outer membrane biogenesis. | Hypothetical protein; COG0477 Permeases of the major facilitator superfamily. | 0.503 |
KYG_18009 | KYG_04929 | Asma family protein; COG2982 Uncharacterized protein involved in outer membrane biogenesis. | COG1629 Outer membrane receptor proteins, mostly Fe transport. | 0.413 |
KYG_18009 | KYG_05174 | Asma family protein; COG2982 Uncharacterized protein involved in outer membrane biogenesis. | Lysylphosphatidylglycerol synthetase/UPF0104; COG0392 Predicted integral membrane protein. | 0.473 |
KYG_18009 | KYG_07815 | Asma family protein; COG2982 Uncharacterized protein involved in outer membrane biogenesis. | Hypothetical protein. | 0.458 |
KYG_18009 | KYG_15780 | Asma family protein; COG2982 Uncharacterized protein involved in outer membrane biogenesis. | Hypothetical protein. | 0.460 |
KYG_18009 | KYG_16862 | Asma family protein; COG2982 Uncharacterized protein involved in outer membrane biogenesis. | COG2833 Uncharacterized protein conserved in bacteria. | 0.412 |
KYG_18009 | KYG_18014 | Asma family protein; COG2982 Uncharacterized protein involved in outer membrane biogenesis. | COG0564 Pseudouridylate synthases, 23S RNA-specific. | 0.471 |
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