STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYG_18296Hypothetical protein. (123 aa)    
Predicted Functional Partners:
KYG_03291
Hypothetical protein.
  
     0.708
KYG_03386
Biotin synthesis protein BioC; COG0500 SAM-dependent methyltransferases.
  
     0.672
KYG_22805
Hypothetical protein.
  
     0.635
KYG_18301
Aminotransferase AlaT; COG0436 Aspartate/tyrosine/aromatic aminotransferase.
       0.590
KYG_18291
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; COG1225 Peroxiredoxin.
  
    0.578
KYG_23280
COG4255 Uncharacterized protein conserved in bacteria.
 
     0.560
KYG_18311
COG0498 Threonine synthase.
       0.557
KYG_18286
PhoH family protein; COG1875 Predicted ATPase related to phosphate starvation-inducible protein PhoH.
 
     0.515
KYG_18306
COG0460 Homoserine dehydrogenase.
       0.498
KYG_18326
COG1977 Molybdopterin converting factor, small subunit.
 
     0.470
Your Current Organism:
Nocardioides sp. SLBN35
NCBI taxonomy Id: 512030
Other names: Acidovorax sp. NO1, N. sp. SLBN-35, Nocardioides sp. SLBN-35
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.