STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYG_19113Hypothetical protein; COG1073 Hydrolases of the alpha/beta superfamily. (349 aa)    
Predicted Functional Partners:
KYG_02487
Family 2 glycosyl transferase; COG0500 SAM-dependent methyltransferases.
   
 
 0.877
KYG_13641
Hypothetical protein; COG0147 Anthranilate/para-aminobenzoate synthases component I.
  
  
 0.862
KYG_02492
COG0438 Glycosyltransferase; overlaps another CDS with the same product name.
   
 
 0.855
KYG_02497
COG0438 Glycosyltransferase; overlaps another CDS with the same product name.
   
 
 0.855
KYG_04639
COG0438 Glycosyltransferase.
   
 
 0.855
KYG_06124
COG0438 Glycosyltransferase.
   
 
 0.855
KYG_12834
COG0438 Glycosyltransferase.
   
 
 0.855
KYG_20645
COG0438 Glycosyltransferase.
   
 
 0.855
KYG_02787
Phospholipase/carboxylesterase; COG0400 Predicted esterase.
     
 0.833
KYG_19108
AraC family transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins.
 
     0.765
Your Current Organism:
Nocardioides sp. SLBN35
NCBI taxonomy Id: 512030
Other names: Acidovorax sp. NO1, N. sp. SLBN-35, Nocardioides sp. SLBN-35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.