STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYG_19521ABC transporter-like protein; COG3839 ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily. (358 aa)    
Predicted Functional Partners:
KYG_19516
COG1175 ABC-type sugar transport systems, permease components; overlaps another CDS with the same product name.
 
 0.998
KYG_19511
Binding-protein-dependent transport systems inner membrane component; COG0395 ABC-type sugar transport system, permease component; overlaps another CDS with the same product name.
 
 0.997
KYG_19501
Extracellular solute-binding protein; COG1653 ABC-type sugar transport system, periplasmic component.
 
 0.993
KYG_19526
ABC transporter-like protein; COG3839 ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
 
  
 
0.987
ugpE
ABC transporter integral membrane protein; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
 0.946
KYG_12209
COG1175 ABC-type sugar transport systems, permease components.
 
 0.936
KYG_14738
COG1175 ABC-type sugar transport systems, permease components; overlaps another CDS with the same product name.
 
 0.933
KYG_14743
Binding-protein-dependent transport systems inner membrane component; COG0395 ABC-type sugar transport system, permease component; overlaps another CDS with the same product name.
 
 0.916
KYG_19506
COG5477 Predicted small integral membrane protein.
 
    0.865
KYG_12204
Extracellular solute-binding protein; COG1653 ABC-type sugar transport system, periplasmic component.
 
 0.810
Your Current Organism:
Nocardioides sp. SLBN35
NCBI taxonomy Id: 512030
Other names: Acidovorax sp. NO1, N. sp. SLBN-35, Nocardioides sp. SLBN-35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.