STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYG_19821Hypothetical protein. (285 aa)    
Predicted Functional Partners:
KYG_20420
Hypothetical protein.
  
     0.761
KYG_05474
COG1846 Transcriptional regulators.
  
     0.743
KYG_21744
DNA-directed DNA polymerase; COG0470 ATPase involved in DNA replication.
  
     0.691
KYG_00145
HemY domain-containing protein; COG3071 Uncharacterized enzyme of heme biosynthesis.
  
     0.688
KYG_09925
Hypothetical protein.
  
     0.675
KYG_01977
Hypothetical protein.
  
     0.671
KYG_19183
ATP synthase subunit I.
  
     0.666
KYG_20048
COG0477 Permeases of the major facilitator superfamily.
  
     0.655
KYG_04739
COG3109 Activator of osmoprotectant transporter ProP.
  
     0.646
KYG_12164
COG3165 Uncharacterized protein conserved in bacteria.
  
     0.633
Your Current Organism:
Nocardioides sp. SLBN35
NCBI taxonomy Id: 512030
Other names: Acidovorax sp. NO1, N. sp. SLBN-35, Nocardioides sp. SLBN-35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.