STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYG_20660Hypothetical protein. (167 aa)    
Predicted Functional Partners:
KYG_20665
COG0248 Exopolyphosphatase.
       0.632
KYG_14733
COG4580 Maltoporin (phage lambda and maltose receptor).
  
     0.588
KYG_23625
Hypothetical protein.
  
     0.535
KYG_05849
Hypothetical protein; COG3240 Phospholipase/lecithinase/hemolysin.
  
     0.512
KYG_23085
MerR family transcriptional regulator.
  
     0.481
KYG_01727
Transposase IS3/IS911 family protein; COG2963 Transposase and inactivated derivatives.
  
     0.469
KYG_14833
Hypothetical protein.
  
     0.466
KYG_00450
MltA-interacting MipA family protein; COG3713 Outer membrane protein V.
  
     0.439
KYG_22461
Putative Crp/Fnr family transcriptional regulator; COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases.
  
     0.402
Your Current Organism:
Nocardioides sp. SLBN35
NCBI taxonomy Id: 512030
Other names: Acidovorax sp. NO1, N. sp. SLBN-35, Nocardioides sp. SLBN-35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.