STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYG_21019Hypothetical protein. (253 aa)    
Predicted Functional Partners:
KYG_21014
SMC domain-containing protein; COG4637 Predicted ATPase.
       0.803
KYG_21024
Hypothetical protein.
       0.784
KYG_21009
COG1002 Type II restriction enzyme, methylase subunits.
       0.782
KYG_21029
COG4930 Predicted ATP-dependent Lon-type protease.
       0.694
KYG_20999
Hypothetical protein.
       0.542
KYG_21004
COG3668 Plasmid stabilization system protein.
       0.542
Your Current Organism:
Nocardioides sp. SLBN35
NCBI taxonomy Id: 512030
Other names: Acidovorax sp. NO1, N. sp. SLBN-35, Nocardioides sp. SLBN-35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.